Commit 1fdc5c12 authored by Niklas Mähler's avatar Niklas Mähler

fixed output bug

parent 37bf9a7a
......@@ -195,7 +195,7 @@ htseq="$outdir/htseq"
## I will just assume that the sortmerna data is symlinked in the repo
[[ -z $SORTMERNADIR ]] && export SORTMERNADIR=$PIPELINE_DIR/../data/sortmerna
if [ ! -e $SORTMERNADIR ]; then
echo "ERROR: could not find the sortmerna data in $SORTMERNADIR" 1&>2
echo "ERROR: could not find the sortmerna data in $SORTMERNADIR" 1>&2
exit 1
fi
......
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